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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939093.1_cds_XP_016483780.1_74864
CDS Infomation

[gene=LOC107804409] [db_xref=GeneID:107804409] [protein=WD and tetratricopeptide repeats protein 1-like isoform X3] [protein_id=XP_016483780.1] [location=complement(join(96958..97319,97902..98013,98809..98919,99138..99308,99437..99582,100573..100678,101558..101675,101763..101878,102352..102480,102585..102692,102805..102939,105401..105478,106410..106478,108635..108706))] [gbkey=CDS]
Sequence

ATGGAATCACTCTGTTTCCACGACGGCAACATCACTGACTTGATCAACAAACGATCCCTC
CACGTTCGCCATGATTCAGGTCATGGATTGCAGATGCACTCCTCTTTGGTGGAAAGAATG
GCCTTAGAAAGAGAATTGGAGGGGCATCAGGGTTGTGTGAATGCGATAGCTTGGAACTCA
AAAGGCTCTCTTTTGATATCTGGATCAGATGATACAAGAATGAATATATGGAATTATTCA
AGCCGCAAACTTTTGCATTCCATTGAGACCGGTCACACTGCCAACATATTCTGCACGAAG
TTTGTTCCAGAAACTTCAGATGAGCTAGTCGTTTCTGGAGCAGGAGATGCTGAAGTTCGT
CTTTTTCATTTGTCTCATCTAAAGGGAAGAGGTGCTGAAGACAGTGCTTTGACTCCATCC
GTTCTATTTCAGTGTCATACCAGGAGGGTTAAAAAAATAGCTGTTGAAGTTGGGAATCCT
CATGTAGTATGGAGTGCTAGTGAAGATGGGACAGTGAGGCAGCATGACTTACGGGAGGGT
GCGTCTTGTCCCCCAGCTGGTTCTTCTCGTCAAGAATGCCGTAATATACTTCTTGACTTA
CGCTGTGGAGCTAAGAAATCATTAACTGATCCTCCGAAACAGTTGTTTGCTCTGAAGTCG
TGTGATATTAGCTCCACAAGGCCTCATTTGCTCCTCGTTGGTGGAAGTGATGCTTTTGCT
CGGTTGTATGATAGGAGAATGCTGCCTCCATTATCCTCGAGTCAAAAAAAGCTGCCACCT
CCACCTTGTGTCAGCTACTTCTGCCCAATGCATCTTTCTGATCGTGGACGTTCCAGCTTT
CATCTGACTCATGTCGCATTTAGTCCTAACGGAGAGGAGGTTTTGCTTAGCTACAGTGGA
GAACATGTATACTTGATGGATGTGAATCCTGCACATGGAGGTTCTATGCCGTATACTTCA
GGAGATGTATCAAACCTGATGAATTTTGCTCCCTTGCTCAATGGAATCGAATTGCAATCA
TCAGTTAGTGGAATCTTTGTAAACGGTTCTTCATCGAAAAGAATTCCAGCTACCAAGCTA
GAAAAGTGCAAAAAATTGATTCAGATGGCAATGAAGTCTTTGAAAGAAGATTCCAACTTT
TATTATGGGATAGAAGCTTGTAATGAAGTCTTGGACGGTTGCAGGGATGACATTGGTCCC
CTTCTAACCTTCGAATGTTTATGCACTCGTGCAGCAATATTGCTCAAGAGGAAGTGGAAA
AATGATGCACATATGGCTATAAGAGATTGTCATAGAGCTAGAAAGCTCAATTCATCTTCC
TTTAGGCCTCTTCTTTTGATCGCTGATGCTCTTTCACAGTTGGGTAAGCATAAAGAAGCA
TTGGAGTTCGCTATTGGCGCTCAATCCTCGGCTCCATCTGATTCTGAAGTTGCCCTAAAG
GTGGAGAGTATAAAAGATAATATCGCTGCAGCTGAAGCAGACAAAGCAAATAAGGCAAAT
GGAGGAGAATCTAGGTCAGATCCTCGGGCAGGAAGAGTATTATCTCTAAGTGACATACTT
TATCGTTCAGACGCAAACAGTGATGCATCGCAAGATGGTCCCAGGTCTGAAAGAGATGAT
TCTGATGATGACGAGGAGTTAGAATTGGCTTTTGAAACATCAATATCTGGTGATGAAGGA
CGGGATGTTGATCCCGATGTCCTCCATGGAAGTTTGAACTTAAGAATTCATAGGAGAGGT
GATTCCACTGGGGAGACTGGACGAGCAAATGGTGCTAGTGGTTCGCCAACCTCGAGTCAA
AAAGAGAAAGCAGCTTACAAGGTTTTGGCTTGA

Peptide Sequence

PEP ID

XP_016483780.1
PEP Infomation

PREDICTED: WD and tetratricopeptide repeats protein 1-like isoform X3 [Nicotiana tabacum]
Sequence

MESLCFHDGNITDLINKRSLHVRHDSGHGLQMHSSLVERMALERELEGHQGCVNAIAWNS
KGSLLISGSDDTRMNIWNYSSRKLLHSIETGHTANIFCTKFVPETSDELVVSGAGDAEVR
LFHLSHLKGRGAEDSALTPSVLFQCHTRRVKKIAVEVGNPHVVWSASEDGTVRQHDLREG
ASCPPAGSSRQECRNILLDLRCGAKKSLTDPPKQLFALKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLSSSQKKLPPPPCVSYFCPMHLSDRGRSSFHLTHVAFSPNGEEVLLSYSG
EHVYLMDVNPAHGGSMPYTSGDVSNLMNFAPLLNGIELQSSVSGIFVNGSSSKRIPATKL
EKCKKLIQMAMKSLKEDSNFYYGIEACNEVLDGCRDDIGPLLTFECLCTRAAILLKRKWK
NDAHMAIRDCHRARKLNSSSFRPLLLIADALSQLGKHKEALEFAIGAQSSAPSDSEVALK
VESIKDNIAAAEADKANKANGGESRSDPRAGRVLSLSDILYRSDANSDASQDGPRSERDD
SDDDEELELAFETSISGDEGRDVDPDVLHGSLNLRIHRRGDSTGETGRANGASGSPTSSQ
KEKAAYKVLA

Transcript Sequence

Gene sequence data has not been registered.